trifusion.ortho.orthomclPairs module¶

trifusion.ortho.orthomclPairs.commonTempTables(cur)[source]¶

trifusion.ortho.orthomclPairs.coorthologs(cur)[source]¶

trifusion.ortho.orthomclPairs.execute(db_dir, nm=None)[source]¶

trifusion.ortho.orthomclPairs.inparalogs(cur)[source]¶

trifusion.ortho.orthomclPairs.log(value)[source]¶

trifusion.ortho.orthomclPairs.normalizeOrthologsSub(cur, co, table)[source]¶

trifusion.ortho.orthomclPairs.orthologTaxonSub(cur, co)[source]¶

trifusion.ortho.orthomclPairs.orthologs(cur)[source]¶