Statistics gallery

A showcase of the plots that can be generated by TriFusion's Statistics module from multiple sequence alignment files

General information

Distribution of sequence size (average)

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Distribution of sequence size (per species)

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Proportion of nucleotides or residues (average)

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Proportion of residues (per species)

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Proportion of nucleotides (per species)

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Distribution of taxa frequency

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Polymorphism and variation

Pairwise sequence similarity (single gene)

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Pairwise sequence similarity (average)

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Pairwise sequence similarity (per species)

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Segregating sites (single gene)

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Segregating sites (average)

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Segregating sites (per species)

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Alignment length/polymorphism correlation

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Allele frequency spectrum

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Missing data

Gene occupancy

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Distribution of missing taxa (average)

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Distribution of missing genes (per species)

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Distribution of missing data (average)

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Distribution of missing data (per species)

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Cumulative frequency of missing genes

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Outlier detection

Missing data outliers (average)

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Missing data outliers (per species)

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Segregating sites outliers (average)

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Segregating sites outliers (per species)

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Sequence size outliers (average)

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Sequence size outliers (per species)

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